miRBase entry: lgi-mir-133

Stem-loop lgi-mir-133

Accession

MI0010121

Description

Lottia gigantea lgi-mir-133 precursor miRNA

Sequence

ugucuguAGCUGGUUGAAAUUGGGCCAAAUuagaaaaaggucaagcauUUGGUCCCCUUCAACCAGCUGUaguug
...(((((((((((((((...(((((((((..((......))....)))))))))..)))))))))))))))...

Structure

ugu               AUU         --ua  aa 
   cuguAGCUGGUUGAA   GGGCCAAAU    ga  a
   |||||||||||||||   |||||||||    ||   
   gaUGUCGACCAACUU   CCUGGUUua    cu  a
guu               -CC         cgaa  gg

Annotation confidence Not enough data

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Genome context

KB199650.1: 5190436-5190510 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from lgi-mir-133

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature lgi-miR-133-5p

Accession	MIMAT0009579
Description	Lottia gigantea lgi-miR-133-5p mature miRNA
Sequence	8 - AGCUGGUUGAAAUUGGGCCAAAU - 30
Evidence	not_experimental

Mature lgi-miR-133-3p

Accession	MIMAT0009580
Description	Lottia gigantea lgi-miR-133-3p mature miRNA
Sequence	49 - UUGGUCCCCUUCAACCAGCUGU - 70
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68