miRBase entry: lgi-mir-216a

Stem-loop lgi-mir-216a

Accession

MI0010129

Description

Lottia gigantea lgi-mir-216a precursor miRNA

Sequence

ucuugauguuugugUAAUCUCAGCUGGUAAUUCUGAGuucuaauaaauacuaauuuucucaaguuacuugccgagauuauauaaauauuacgu
...((((((((((((((((((.((.(((((((.((((....................))))))))))).)).))))))))))))))))))...

Structure

ucu                  A  U       C    uucuaauaa 
   ugauguuugugUAAUCUC GC GGUAAUU UGAG         a
   |||||||||||||||||| || ||||||| ||||          
   auuauaaauauauuagag cg ucauuga acuc         u
ugc                  c  u       -    uuuuaauca

Annotation confidence Not enough data

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Genome context

KB201459.1: 807321-807413 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from lgi-mir-216a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature lgi-miR-216a

Accession	MIMAT0009588
Description	Lottia gigantea lgi-miR-216a mature miRNA
Sequence	15 - UAAUCUCAGCUGGUAAUUCUGAG - 37
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68