Stem-loop sko-mir-9

Accession

MI0010148

Description

Saccoglossus kowalevskii sko-mir-9 precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

cucucguuuucUCUUUGGUUAUCUAGCUGUAUgaguguacaugacauuAUAAAGCUAGGUUACCAAAGACAaaaacaga
.(((.(((((.((((((((.((((((((.(((((.(((.....)))))))).)))))))).))))))))..))))))))

Structure

c   c     -c        U        G     g   a 
 ucu guuuu  UCUUUGGU AUCUAGCU UAUga ugu c
 ||| |||||  |||||||| |||||||| ||||| ||| a
 aga caaaa  AGAAACCA UGGAUCGA AUAuu aca u
-   -     AC        U        A     -   g 

Annotation confidence Not enough data

Genome context

GL013644.1: 164497-164575 [-]

Mature sko-miR-9-5p

• Accession: MIMAT0009610
• Description: Saccoglossus kowalevskii sko-miR-9-5p mature miRNA
• Sequence: 12 - UCUUUGGUUAUCUAGCUGUAU - 32
• Evidence: experimental ; 454 [1]

Mature sko-miR-9-3p

• Accession: MIMAT0009618
• Description: Saccoglossus kowalevskii sko-miR-9-3p mature miRNA
• Sequence: 49 - AUAAAGCUAGGUUACCAAAGACA - 71
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68