Stem-loop sko-mir-71

Accession

MI0010155

Description

Saccoglossus kowalevskii sko-mir-71 precursor miRNA mir-71

Gene
family

RF00832; mir-71

Sequence

gcauuacugguggguguuuugUGAAAGACACAGGUAGUGAGAUaguguaugguaaacaucucgcuacuuuggucucucuccauagcaccuugccaaaaucu
.......(((((((((((.((.((.((((..((((((((((((.((.........))))))))))))))..)))).))..)).)))))).)))))......

Structure

gcauuac     -      u  -U  A    AC            a  gua 
       uggug gguguu ug  GA AGAC  AGGUAGUGAGAU gu   u
       ||||| |||||| ||  || ||||  |||||||||||| ||   g
       accgu ccacga ac  cu ucug  uucaucgcucua ca   g
-ucuaaa     u      u  cu  c    gu            -  aau 

Annotation confidence Not enough data

Genome context

GL016280.1: 55163-55263 [-]

Mature sko-miR-71

• Accession: MIMAT0009617
• Description: Saccoglossus kowalevskii sko-miR-71 mature miRNA
• Sequence: 22 - UGAAAGACACAGGUAGUGAGAU - 43
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68