miRBase entry: sko-mir-125a

Stem-loop sko-mir-125a


Accession
MI0010163
Description
Saccoglossus kowalevskii sko-mir-125a precursor miRNA


Sequence

cucuauauguguauuaccuaaUCCCUGAGACCCUAACUUGUGAgaauuacccagcauucacagguuaguggcuuaggaauuggguggugcauucauagcaac
..((((..((((((((((((((.((((((.((((((((((((((............)))))))))))).)))))))).))))))))))))))..))))....

Structure
--cu    au              C      A  -            aauua 
    cuau  guguauuaccuaaU CCUGAG CC CUAACUUGUGAg     c
    ||||  |||||||||||||| |||||| || ||||||||||||      
    gaua  uacgugguggguua ggauuc gg gauuggacacuu     c
caac    cu              a      -  u            acgac 


Annotation confidence Not enough data
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Genome context
GL017840.1: 4544-4645 [-]

Database links

Mature sko-miR-125a

Accession MIMAT0009626
Description Saccoglossus kowalevskii sko-miR-125a mature miRNA
Sequence 22 - UCCCUGAGACCCUAACUUGUGA - 43
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68