Stem-loop sko-mir-133

Accession

MI0010164

Description

Saccoglossus kowalevskii sko-mir-133 precursor miRNA

Sequence

ugcaauugagauguggugcugaagcugguaaaucggaaccaaaucauauuacaaauggauUUGGUCCCCUUCAACCAGCUGUagcauggcauucaaaccaa
.....(((((.(((.((((((.(((((((.....((.((((((((.((((...)))))))))))).)).....))))))).)))))).)))))))).....

Structure

ugcaa     a   g      a       aaauc  a        a    a 
     uugag ugu gugcug agcuggu     gg accaaauc uauu  
     ||||| ||| |||||| |||||||     || |||||||| |||| c
     aacuu acg uacgaU UCGACCA     CC UGGUUuag guaa  
aacca     -   g      G       ACUUC  C        -    a 

Annotation confidence Not enough data

Genome context

GL012728.1: 54090-54190 [-]

Mature sko-miR-133

• Accession: MIMAT0009627
• Description: Saccoglossus kowalevskii sko-miR-133 mature miRNA
• Sequence: 61 - UUGGUCCCCUUCAACCAGCUGU - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68