Stem-loop sko-mir-153

Accession

MI0010166

Description

Saccoglossus kowalevskii sko-mir-153 precursor miRNA mir-153

Gene
family

RF00650; mir-153

Literature search

1 open access papers mention sko-mir-153
(2 sentences)

Sequence

uacuaaccuugccaguggccuagucauuuuugugcauaugcaagcugucaaaucaaucacUUGCAUAGUCACAAAAGUGAUUgggacaagugugcgcacuc
.........(((((.(.(((((((((((((((((..((((((((.((..........))))))))))..)))))))))))))))).).).)).))).....

Structure

uacuaaccu   -  g g -                ca        c  ucaa 
         ugc ca u g ccuagucauuuuugug  uaugcaag ug    a
         ||| || | | ||||||||||||||||  |||||||| ||     
         gcg gu a c gggUUAGUGAAAACAC  AUACGUUc ac    u
----cucac   u  g a a                UG        -  uaac 

Annotation confidence Not enough data

Genome context

GL018166.1: 97650-97750 [+]

Mature sko-miR-153-3p

• Accession: MIMAT0009629
• Description: Saccoglossus kowalevskii sko-miR-153-3p mature miRNA
• Sequence: 61 - UUGCAUAGUCACAAAAGUGAUU - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68