Stem-loop sko-mir-252a

Accession

MI0010174

Description

Saccoglossus kowalevskii sko-mir-252a precursor miRNA mir-252

Gene
family

RF00838; mir-252

Sequence

caugacuggcugauccaauaCUAAGUACUAGUGCCGCAGGAGUcguauauuugaguaacccugucguacuugugcuuaacauaggaugugccaauauucau
......((((..((((.((..(((((((.(((((.((((((.(((......))).)...))))).))))).)))))))..)).))))..))))........

Structure

--caugac    ug    a  aC       U     C     --- G   ua 
        uggc  aucc au  UAAGUAC AGUGC GCAGG   A Ucg  u
        ||||  |||| ||  ||||||| ||||| |||||   | |||   
        accg  uagg ua  auucgug ucaug ugucc   u agu  a
uacuuaua    ug    a  ca       u     c     caa g   uu 

Annotation confidence Low

Genome context

GL013840.1: 13957-14057 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from sko-mir-252a

Mature sko-miR-252a

• Accession: MIMAT0009638
• Description: Saccoglossus kowalevskii sko-miR-252a mature miRNA
• Sequence: 21 - CUAAGUACUAGUGCCGCAGGAGU - 43
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68