Stem-loop sko-mir-252b

Accession

MI0010175

Description

Saccoglossus kowalevskii sko-mir-252b precursor miRNA mir-252

Gene
family

RF00838; mir-252

Sequence

uacauugguucuuauccuugCUAAGUAGUAGUGCCGCAGGUAAuuaaaauaaucauuuaccugcucucuacugcuuaacaagguauaaccaaaaaucaucg
....((((((..((.(((((.((((((((((.(..((((((((.............)))))))).).)))))))))).))))))).)))))).........

Structure

-----uaca      cu  u     C          U CC        uuaaa 
         uugguu  ua ccuug UAAGUAGUAG G  GCAGGUAA     a
         ||||||  || ||||| |||||||||| |  ||||||||     u
         aaccaa  au ggaac auucgucauc c  cguccauu     a
gcuacuaaa      -u  -     a          u -u        uacua 

Annotation confidence Not enough data

Genome context

GL013840.1: 19591-19691 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from sko-mir-252b

Mature sko-miR-252b

• Accession: MIMAT0009639
• Description: Saccoglossus kowalevskii sko-miR-252b mature miRNA
• Sequence: 21 - CUAAGUAGUAGUGCCGCAGGUAA - 43
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68