Stem-loop sko-mir-315

Accession

MI0010178

Description

Saccoglossus kowalevskii sko-mir-315 precursor miRNA mir-315

Gene
family

RF00717; mir-315

Sequence

ucacauugacucuggcgccgUUUUGAUUGUUGCUCAGAAAGccuuaugcuucuggucggcuuucggguaacaauuaaaaauagcgagagaguuuucaucuc
.......((((((..(((..(((((((((((((((.(((((((..............))))))))))))))))))))))...)))..))))))........

Structure

-ucacauu      gg   -cg               A       uuaugc 
        gacucu  cgc   UUUUGAUUGUUGCUC GAAAGcc      u
        ||||||  |||   ||||||||||||||| |||||||       
        uugaga  gcg   aaaauuaacaauggg cuuucgg      u
cucuacuu      ga   aua               -       cugguc 

Annotation confidence Low

Genome context

GL015465.1: 353989-354089 [-]

Mature sko-miR-315

• Accession: MIMAT0009642
• Description: Saccoglossus kowalevskii sko-miR-315 mature miRNA
• Sequence: 21 - UUUUGAUUGUUGCUCAGAAAG - 41
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68