Stem-loop spu-mir-9

Accession

MI0010189

Description

Strongylocentrotus purpuratus spu-mir-9 precursor miRNA

Sequence

ucauacugacucugcuuuucUCUUUGGUUAUCUAGCUGUAUGagugaugucaaugcaucAUAAAGCUAGGUUACCAAAGAUaagugccuguugucacaugu
......((((.(.((.(((.((((((((.((((((((......(((((((....)))))))..)))))))).)))))))).))).))..)..)))).....

Structure

ucauac    -u -u  u   c        U        GUAUGa       c 
      ugac  c  gc uuu UCUUUGGU AUCUAGCU      gugaugu a
      ||||  |  || ||| |||||||| ||||||||      |||||||  
      acug  g  cg gaa AGAAACCA UGGAUCGA      UAcuacg a
-uguac    uu uc  u   U        U        ----AA       u 

Annotation confidence Not enough data

Genome context

KN915310.1: 590803-590903 [+]

Mature spu-miR-9-5p

• Accession: MIMAT0009653
• Description: Strongylocentrotus purpuratus spu-miR-9-5p mature miRNA
• Sequence: 21 - UCUUUGGUUAUCUAGCUGUAUG - 42
• Evidence: experimental ; 454 [1]

Mature spu-miR-9-3p

• Accession: MIMAT0009661
• Description: Strongylocentrotus purpuratus spu-miR-9-3p mature miRNA
• Sequence: 60 - AUAAAGCUAGGUUACCAAAGAU - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68