Stem-loop spu-mir-252a

Accession

MI0010208

Description

Strongylocentrotus purpuratus spu-mir-252a precursor miRNA mir-252

Gene
family

RF00838; mir-252

Sequence

cacgugacuauguuccgucCUAAGUACUAGUGCCGUAGGUUaacugagaaggaaagugaagcuagacuauagcuucucagaccuguaguacuaguacuuaa
.(((.(((...))).)))..(((((((((((((..(((((...((((((((...(((........)))....)))))))))))))..))))))))))))).

Structure

cacgugacuauguuccgucC             CG     Uaa        -gaa   gaa 
                    UAAGUACUAGUGC  UAGGU   cugagaag    agu   g
                    |||||||||||||  |||||   ||||||||    |||    
                    auucaugaucaug  gucca   gacucuuc    uca   c
-------------------a             au     ---        gaua   gau 

Annotation confidence Not enough data

Genome context

KN912884.1: 120521-120621 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from spu-mir-252a

Mature spu-miR-252a

• Accession: MIMAT0009672
• Description: Strongylocentrotus purpuratus spu-miR-252a mature miRNA
• Sequence: 20 - CUAAGUACUAGUGCCGUAGGUU - 41
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68