miRBase entry: lgi-mir-252b

Stem-loop lgi-mir-252b

Accession

MI0010218

Description

Lottia gigantea lgi-mir-252b precursor miRNA

Sequence

guugucugucaugguaacuAUAAGUAGUGGUGCCGCAGGUAugauauugauggcuaccugcuucaucacuauuuacuguuaaucugauaaugucaccaaga
......(((((.((((((..((((((((((((..((((((((.((....)).).)))))))..))))))))))))..))).))))))))............

Structure

------guuguc     u   -   uA            CC       - g  a 
            uguca ggu aac  UAAGUAGUGGUG  GCAGGUA u au u
            ||||| ||| |||  ||||||||||||  ||||||| | ||  
            auagu cua uug  auuuaucacuac  cguccau g ua u
agaaccacugua     -   a   uc            uu       c g  g

Annotation confidence Not enough data

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Genome context

KB200702.1: 486110-486210 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from lgi-mir-252b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature lgi-miR-252b

Accession	MIMAT0009682
Description	Lottia gigantea lgi-miR-252b mature miRNA
Sequence	20 - AUAAGUAGUGGUGCCGCAGGUA - 41
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68