Stem-loop cte-mir-2001

Accession

MI0010234

Description

Capitella teleta cte-mir-2001 precursor miRNA mir-2001

Gene
family

RF03374; mir-2001

Sequence

cccguuccucacgUUGUGACCGUUAUAAUGGGCAUGaagucauucugagcaaugcuccuuauaacgaucucaaggcg
...........(.(((.((.((((((((.((((((....(((...)))...)))))).)))))))).)).))).)..

Structure

cccguuccuca g   U  C        U      Gaag   u 
           c UUG GA CGUUAUAA GGGCAU    uca  
           | ||| || |||||||| ||||||    ||| u
           g aac cu gcaauauu cucgua    agu  
---------gc g   u  a        c      -acg   c 

Annotation confidence Low

Genome context

KB302014.1: 188007-188083 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cte-mir-2001

Mature cte-miR-2001

• Accession: MIMAT0009705
• Description: Capitella teleta cte-miR-2001 mature miRNA
• Sequence: 14 - UUGUGACCGUUAUAAUGGGCAUG - 36
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68