Stem-loop isc-mir-2001

Accession

MI0010250

Description

Ixodes scapularis isc-mir-2001 precursor miRNA

Literature search

1 open access papers mention isc-mir-2001
(1 sentences)

Sequence

uccuggccgccUUGUGACCGUUACAAUGGGCAUGuugguccacgugcagaugcccacugucacguucacugggcggac
......((((((.((((.(((.(((.(((((((.(((.........)))))))))).))).))).)))).))))))..

Structure

uccugg      U    C   U   A       G   guc 
      ccgccU GUGA CGU ACA UGGGCAU uug   c
      |||||| |||| ||| ||| ||||||| |||   a
      ggcggg cacu gca ugu acccgua gac   c
----ca      u    u   c   c       -   gug 

Annotation confidence Not enough data

Genome context

DS758004: 38911-38988 [-]

Mature isc-miR-2001

• Accession: MIMAT0009721
• Description: Ixodes scapularis isc-miR-2001 mature miRNA
• Sequence: 12 - UUGUGACCGUUACAAUGGGCAUG - 34
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68