miRBase entry: lgi-mir-1994a

Stem-loop lgi-mir-1994a

Accession

MI0010253

Description

Lottia gigantea lgi-mir-1994a precursor miRNA

Sequence

cucucaggggaagucacucucgucuccaugccccgauaucagcaUGAGACAGUGUGUCCUCCCUUGaguga
(.(((((((((.(.(((.((.(((((.((((..........))))))))))).))).).))))))))).).

Structure

- u         a u   u  c     c    cccg 
 c cucagggga g cac cu gucuc augc    a
 | ||||||||| | ||| || ||||| ||||     
 g gaGUUCCCU C GUG GA CAGAG Uacg    u
a u         C U   U  -     -    acua

Annotation confidence Not enough data

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Genome context

KB202283.1: 5290034-5290104 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from lgi-mir-1994a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature lgi-miR-1994a

Accession	MIMAT0009724
Description	Lottia gigantea lgi-miR-1994a mature miRNA
Sequence	45 - UGAGACAGUGUGUCCUCCCUUG - 66
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68