miRBase entry: lgi-mir-1985

Stem-loop lgi-mir-1985

Accession

MI0010256

Description

Lottia gigantea lgi-mir-1985 precursor miRNA

Sequence

ugccaUGCCAUUUUUAUCAGUCACUGUGAuucauuauucuacagugccuguuagaaugguuugaug
...((.((((((((...(((.((((((((........)).)))))).)))..)))))))).))...

Structure

ugc  U        UAU   U      -  uuc 
   ca GCCAUUUU   CAG CACUGU GA   a
   || ||||||||   ||| |||||| ||    
   gu ugguaaga   guc gugaca cu   u
gua  u        -uu   c      u  uau

Annotation confidence Not enough data

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Genome context

KB202283.1: 4881325-4881390 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from lgi-mir-1985

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature lgi-miR-1985

Accession	MIMAT0009727
Description	Lottia gigantea lgi-miR-1985 mature miRNA
Sequence	6 - UGCCAUUUUUAUCAGUCACUGUGA - 29
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68