Stem-loop sko-mir-2011

Accession

MI0010268

Description

Saccoglossus kowalevskii sko-mir-2011 precursor miRNA mir-2011

Gene
family

RF03687; mir-2011

Sequence

auguguuuauuucaaugcggucacugucacaccuuaaggugucaaaauuaaauuacACCAAGGUGUGUUAGUGAUGACauugcaauagaacua
..((.((((((.(((((..(((((((.((((((((..(((((............))))))))))))).)))))))..))))).))))))))..

Structure

au  g      u     cg       u        aa     caaaa 
  gu uuuauu caaug  gucacug cacaccuu  ggugu     u
  || |||||| |||||  ||||||| ||||||||  |||||      
  ca agauaa guuaC  UAGUGAU GUGUGGAA  CCAca     u
au  -      c     AG       U        --     uuaaa 

Annotation confidence Not enough data

Genome context

GL012229.1: 416850-416942 [+]

Mature sko-miR-2011

• Accession: MIMAT0009739
• Description: Saccoglossus kowalevskii sko-miR-2011 mature miRNA
• Sequence: 57 - ACCAAGGUGUGUUAGUGAUGAC - 78
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68