Stem-loop nve-mir-2025

Accession

MI0010285

Description

Nematostella vectensis nve-mir-2025 precursor miRNA

Sequence

40994 reads, 28729 reads per million, 24 experiments

aacaauuaggccacauacaaAGCUUUCGAUGGCUAGAAAAUCcuuagugaUUUUUUAGCCCGCGGAAGUUGUguugccuggccaauauuaccauu
........(((((...(((.((((((((..((((((((((((......))))))))))))..)))))))).)))....)))))............

Structure

----aacaauua     -cau   a        AU            cu 
            ggcca    aca AGCUUUCG  GGCUAGAAAAUC  u
            |||||    ||| ||||||||  ||||||||||||   
            ccggu    ugU UUGAAGGC  CCGAUUUUUUag  a
uuaccauuauaa     ccgu   G        GC            ug 

Annotation confidence Medium

Genome context

scaffold_51: 151656-151750 [-]

Mature nve-miR-2025-5p

• Accession: MIMAT0009759
• Description: Nematostella vectensis nve-miR-2025-5p mature miRNA
• Sequence: 21 - AGCUUUCGAUGGCUAGAAAAUC - 42
• Evidence: experimental ; 454 [1], Illumina [2]

Mature nve-miR-2025-3p

• Accession: MIMAT0009760
• Description: Nematostella vectensis nve-miR-2025-3p mature miRNA
• Sequence: 51 - UUUUUUAGCCCGCGGAAGUUGU - 72
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663