Stem-loop nve-mir-2031

Accession

MI0010297

Description

Nematostella vectensis nve-mir-2031 precursor miRNA

Sequence

1170 reads, 1259 reads per million, 21 experiments

agaccaccuaaaaUACGGCACUCUAUUUAUGGUACUuuuaagUACCAUAAAUAGAGUGCCGUAUUuuaggugguuaa
.(((((((((((((((((((((((((((((((((((....)))))))))))))))))))))))))))))))))))..

Structure

-a                                   u 
  gaccaccuaaaaUACGGCACUCUAUUUAUGGUACU u
  |||||||||||||||||||||||||||||||||||  
  uugguggauuUUAUGCCGUGAGAUAAAUACCAUga u
aa                                   a 

Annotation confidence Medium

Genome context

scaffold_48: 869417-869493 [+]

Mature nve-miR-2031-5p

• Accession: MIMAT0009782
• Description: Nematostella vectensis nve-miR-2031-5p mature miRNA
• Sequence: 14 - UACGGCACUCUAUUUAUGGUACU - 36
• Evidence: experimental ; 454 [1], Illumina [2]

Mature nve-miR-2031-3p

• Accession: MIMAT0009783
• Description: Nematostella vectensis nve-miR-2031-3p mature miRNA
• Sequence: 43 - UACCAUAAAUAGAGUGCCGUAUU - 65
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663