Stem-loop nve-mir-2032a

Accession

MI0010298

Description

Nematostella vectensis nve-mir-2032a precursor miRNA

Sequence

509 reads, 478 reads per million, 14 experiments

ucgcgagcucaccguugcugUCGCUGCGACAGUUAGCUAGcauuuauugcgAGGUAACUGUUGCAGCAUCCaugacugugaggucaguauu
....((.(((((.((((..(..(((((((((((((.((.(((.....))).)).)))))))))))))..)..)))).))))).))......

Structure

--ucgc  g     c    cu UC             G  A   u 
      ga cucac guug  g  GCUGCGACAGUUA CU Gca u
      || ||||| ||||  |  ||||||||||||| || ||| u
      cu gagug cagu  C  CGACGUUGUCAAU GA cgu a
uuauga  g     u    aC UA             G  g   u 

Annotation confidence Medium

Genome context

scaffold_161: 473285-473375 [-]

Mature nve-miR-2032a-5p

• Accession: MIMAT0009784
• Description: Nematostella vectensis nve-miR-2032a-5p mature miRNA
• Sequence: 21 - UCGCUGCGACAGUUAGCUAG - 40
• Evidence: experimental ; 454 [1], Illumina [2]

Mature nve-miR-2032a-3p

• Accession: MIMAT0009785
• Description: Nematostella vectensis nve-miR-2032a-3p mature miRNA
• Sequence: 52 - AGGUAACUGUUGCAGCAUCC - 71
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663