Stem-loop nve-mir-2036

Accession

MI0010303

Description

Nematostella vectensis nve-mir-2036 precursor miRNA

Sequence

8165 reads, 5507 reads per million, 23 experiments

auaagagucgugccaggaccCGGUGAGAACGUACAGUAAGCAcuugacgaugUAUAUUGUACGACUCUCAUCGUAuccugcacggcaaugaaca
......(((((((.((((..((((((((.(((((((((.(((........))).)))))))))..))))))))..)))))))))))........

Structure

--auaaga       c    cc        -A         A   cuu 
        gucgugc agga  CGGUGAGA  CGUACAGUA GCA   g
        ||||||| ||||  ||||||||  ||||||||| |||    
        cggcacg uccu  GCUACUCU  GCAUGUUAU Ugu   a
acaaguaa       -    AU        CA         A   agc 

Annotation confidence Medium

Genome context

scaffold_24: 1097561-1097654 [-]

Mature nve-miR-2036-5p

• Accession: MIMAT0009794
• Description: Nematostella vectensis nve-miR-2036-5p mature miRNA
• Sequence: 21 - CGGUGAGAACGUACAGUAAGCA - 42
• Evidence: experimental ; 454 [1]

Mature nve-miR-2036-3p

• Accession: MIMAT0009795
• Description: Nematostella vectensis nve-miR-2036-3p mature miRNA
• Sequence: 53 - UAUAUUGUACGACUCUCAUCGUA - 75
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663