Stem-loop nve-mir-2037

Accession

MI0010304

Description

Nematostella vectensis nve-mir-2037 precursor miRNA

Sequence

1654 reads, 1041 reads per million, 22 experiments

agcuaggucuuggucaccguggUAAAAGCCGUCCAAGCACCcucuuggcagUGUGAUUGGAGACUUUUACCGUggucugagaucagucauac
.(((.((((((((..(((((((((((((.(.(((((((((((....))..))))..)))))).)))))))))))))))))))))))).....

Structure

----a   a        uc             C G     --    --  u 
     gcu ggucuugg  accguggUAAAAG C UCCAA  GCAC  Cc c
     ||| ||||||||  ||||||||||||| | |||||  ||||  ||  
     uga cuagaguc  uggUGCCAUUUUC G AGGUU  UGUg  gg u
cauac   -        --             A -     AG    ac  u 

Annotation confidence Low

Genome context

scaffold_433: 29619-29710 [+]

Mature nve-miR-2037-5p

• Accession: MIMAT0009796
• Description: Nematostella vectensis nve-miR-2037-5p mature miRNA
• Sequence: 23 - UAAAAGCCGUCCAAGCACC - 41
• Evidence: experimental ; 454 [1]

Mature nve-miR-2037-3p

• Accession: MIMAT0009797
• Description: Nematostella vectensis nve-miR-2037-3p mature miRNA
• Sequence: 52 - UGUGAUUGGAGACUUUUACCGU - 73
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663