Stem-loop nve-mir-2039

Accession

MI0010306

Description

Nematostella vectensis nve-mir-2039 precursor miRNA

Sequence

210 reads, 512 reads per million, 13 experiments

uuguauaAGCCUACCUUUAUUUUAUUUuauauguaaAUAAAAUAAAGGUAGGCUCUcuaa
.......((((((((((((((((((((.......))))))))))))))))))))......

Structure

uuguaua                    ua 
       AGCCUACCUUUAUUUUAUUU  u
       ||||||||||||||||||||  a
       UCGGAUGGAAAUAAAAUAaa  u
-aaucUC                    ug 

Annotation confidence Not enough data

Genome context

scaffold_264: 119657-119716 [-]

Mature nve-miR-2039-5p

• Accession: MIMAT0009800
• Description: Nematostella vectensis nve-miR-2039-5p mature miRNA
• Sequence: 8 - AGCCUACCUUUAUUUUAUUU - 27
• Evidence: experimental ; 454 [1]

Mature nve-miR-2039-3p

• Accession: MIMAT0009801
• Description: Nematostella vectensis nve-miR-2039-3p mature miRNA
• Sequence: 37 - AUAAAAUAAAGGUAGGCUCU - 56
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663