Stem-loop nve-mir-2045

Accession

MI0010313

Description

Nematostella vectensis nve-mir-2045 precursor miRNA

Sequence

500 reads, 465 reads per million, 22 experiments

ucuuauuaaugacaauaguuuUCCCAGAGUGUUGAGUUCAUACAAgauuucuugugcuuGUAUGGUAAUUAAUCUCUGGUACAuagauuccauaaaauaca
.......................((((((.(((((..(((((((((((.....)).)))))))))...)))))))))))......................

Structure

ucuuauuaaugacaauaguuuUC      U     -GU         -  u 
                       CCAGAG GUUGA   UCAUACAAg au u
                       |||||| |||||   ||||||||| || c
                       GGUCUC UAAUU   GGUAUGuuc ug u
-acauaaaauaccuuagauACAU      -     AAU         g  u 

Annotation confidence Low

Genome context

scaffold_43: 185999-186099 [+]

Mature nve-miR-2045-5p

• Accession: MIMAT0009814
• Description: Nematostella vectensis nve-miR-2045-5p mature miRNA
• Sequence: 22 - UCCCAGAGUGUUGAGUUCAUACAA - 45
• Evidence: experimental ; 454 [1], Illumina [2]

Mature nve-miR-2045-3p

• Accession: MIMAT0009815
• Description: Nematostella vectensis nve-miR-2045-3p mature miRNA
• Sequence: 60 - GUAUGGUAAUUAAUCUCUGGUACA - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663