Stem-loop nve-mir-2046

Accession

MI0010314

Description

Nematostella vectensis nve-mir-2046 precursor miRNA

Sequence

144 reads, 149 reads per million, 16 experiments

agaguaaauuuuauggcauuaCAUCACUUCAUAGCUAUUUACUCUuaagagUAAAUAGCUAUGAAGUGAUACAaugccauaaaauuuugac
.....(((((((((((((((..((((((((((((((((((((((....))))))))))))))))))))))..)))))))))))))))....

Structure

agagu               aC                      U 
     aaauuuuauggcauu  AUCACUUCAUAGCUAUUUACUC u
     |||||||||||||||  ||||||||||||||||||||||  
     uuuaaaauaccguaA  UAGUGAAGUAUCGAUAAAUgag a
-cagu               CA                      a 

Annotation confidence Medium

Genome context

scaffold_261: 230225-230315 [+]

Mature nve-miR-2046-5p

• Accession: MIMAT0009816
• Description: Nematostella vectensis nve-miR-2046-5p mature miRNA
• Sequence: 22 - CAUCACUUCAUAGCUAUUUACUCU - 45
• Evidence: experimental ; 454 [1]

Mature nve-miR-2046-3p

• Accession: MIMAT0009817
• Description: Nematostella vectensis nve-miR-2046-3p mature miRNA
• Sequence: 52 - UAAAUAGCUAUGAAGUGAUACA - 73
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197