Stem-loop nve-mir-2048

Accession

MI0010316

Description

Nematostella vectensis nve-mir-2048 precursor miRNA

Sequence

37 reads, 102 reads per million, 7 experiments

guauaaaGGCGUUUUGUUUUAGAUGUCUugagggagaacagucgagaaaggucucccucaagACACCUGAAACAAAACGCAAuga
........((((((((((((((.((((((((((((((.(..........).)))))))))))))).)))))))))))))).....

Structure

guauaaaG              A              a aguc 
        GCGUUUUGUUUUAG UGUCUugagggaga c    g
        |||||||||||||| |||||||||||||| |     
        CGCAAAACAAAGUC ACAgaacucccucu g    a
---aguAA              C              g aaag 

Annotation confidence Low

Genome context

scaffold_26: 921451-921535 [+]

Mature nve-miR-2048-5p

• Accession: MIMAT0009820
• Description: Nematostella vectensis nve-miR-2048-5p mature miRNA
• Sequence: 8 - GGCGUUUUGUUUUAGAUGUCU - 28
• Evidence: experimental ; 454 [1]

Mature nve-miR-2048-3p

• Accession: MIMAT0009821
• Description: Nematostella vectensis nve-miR-2048-3p mature miRNA
• Sequence: 63 - ACACCUGAAACAAAACGCAA - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197