Stem-loop nve-mir-2049

Accession

MI0010317

Description

Nematostella vectensis nve-mir-2049 precursor miRNA

Sequence

528 reads, 908 reads per million, 17 experiments

aucauccaugagccguauucaaugCAAAUGCACGCAAAUGAAGAUGAaacaaucgacucGAUUCAUGUGCAUGCAUUUACAuugaauacgucucauggau
...(((((((((.(((((((((((.(((((((.(((.(((((..(((..........))).))))).))).))))))).))))))))))).)))))))))

Structure

auc         c           C       C   A     GA   aaca 
   auccaugag cguauucaaug AAAUGCA GCA AUGAA  UGA    a
   ||||||||| ||||||||||| ||||||| ||| |||||  |||     
   uagguacuc gcauaaguuAC UUUACGU CGU UACUU  Gcu    u
---         u           A       A   G     -A   cagc 

Annotation confidence Low

Genome context

scaffold_7: 126993-127092 [-]

Mature nve-miR-2049-5p

• Accession: MIMAT0009822
• Description: Nematostella vectensis nve-miR-2049-5p mature miRNA
• Sequence: 25 - CAAAUGCACGCAAAUGAAGAUGA - 47
• Evidence: experimental ; 454 [1]

Mature nve-miR-2049-3p

• Accession: MIMAT0009823
• Description: Nematostella vectensis nve-miR-2049-3p mature miRNA
• Sequence: 60 - GAUUCAUGUGCAUGCAUUUACA - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197