miRBase entry: cfa-mir-133a

Stem-loop cfa-mir-133a

Accession

MI0010326

Description

Canis familiaris cfa-mir-133a precursor miRNA

Sequence

caaugcuuugcuagagcugguaaaauggaaccaaaucgccucuucaauggauUUGGUCCCCUUCAACCAGCUGUagcuaugcauuga
((((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))).

Structure

-      uuu    g       aa  u  a        gccuc 
 caaugc   gcua agcuggu  aa gg accaaauc     u
 ||||||   |||| |||||||  || || ||||||||      
 guuacg   cgaU UCGACCA  UU CC UGGUUuag     u
a      uau    G       AC  C  C        guaac

Annotation confidence Not enough data

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Genome context

chr7: 66217486-66217572 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-133a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-133a

Accession	MIMAT0009834
Description	Canis familiaris cfa-miR-133a mature miRNA
Sequence	53 - UUGGUCCCCUUCAACCAGCUGU - 74
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39