Stem-loop cfa-mir-7-3

Accession

MI0010330

Description

Canis lupus familiaris cfa-mir-7-3 precursor miRNA

Sequence

5050703 reads, 33004.0 reads per million, 82 experiments

gagugguuguggucuagugcugugUGGAAGACUAGUGAUUUUGUUGUUcugauguacuaugaCAACAAGUCACAGCUUCCUCAUagcg
.(.(((.......))).)((((((.(((((.((.(((((((.((((((.((......)).)))))))))))))))))))).)))))).

Structure

gagugguuguggucuagu      U     A  A       U      c  au 
                  gcugug GGAAG CU GUGAUUU GUUGUU ug  g
                  |||||| ||||| || ||||||| |||||| ||   
                  cgaUAC CCUUC GA CACUGAA CAACag au  u
-----------------g      U     -  -       -      u  ca 

Annotation confidence High

Genome context

20: 55647581-55647668 [-]

Mature cfa-miR-7-3-5p

• Accession: MIMAT0060783
• Description: Canis lupus familiaris cfa-miR-7-3-5p mature miRNA
• Sequence: 25 - UGGAAGACUAGUGAUUUUGUUGUU - 48
• Evidence: not_experimental

Mature cfa-miR-7-3-3p

• Accession: MIMAT0051748
• Description: Canis lupus familiaris cfa-miR-7-3-3p mature miRNA
• Sequence: 63 - CAACAAGUCACAGCUUCCUCAU - 84
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39