Stem-loop cfa-mir-10b

Accession

MI0010331

Description

Canis lupus familiaris cfa-mir-10b precursor miRNA

Literature search

8 open access papers mention cfa-mir-10b
(8 sentences)

Sequence

45306621 reads, 84970.0 reads per million, 82 experiments

guaacguugucuauauaUACCCUGUAGAACCGAAUUUGUgugguauccacauagucACAGAUUCGAUUCUAGGGGAAUauauggucgaugcaaaaacuuca
....(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).)))))...........

Structure

-------guaa     u        A    G     C          u g   c 
           cguug cuauauaU CCCU UAGAA CGAAUUUGUg g uau c
           ||||| |||||||| |||| ||||| |||||||||| | |||  
           guagc gguauaUA GGGG AUCUU GCUUAGACAc u aua a
acuucaaaaac     u        A    -     A          - g   c 

Annotation confidence High

Genome context

36: 20099826-20099926 [+]

Mature cfa-miR-10b-5p

• Accession: MIMAT0009837
• Description: Canis lupus familiaris cfa-miR-10b-5p mature miRNA
• Sequence: 18 - UACCCUGUAGAACCGAAUUUGU - 39
• Evidence: not_experimental

Mature cfa-miR-10b-3p

• Accession: MIMAT0051889
• Description: Canis lupus familiaris cfa-miR-10b-3p mature miRNA
• Sequence: 57 - ACAGAUUCGAUUCUAGGGGAAU - 78
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39