Stem-loop cfa-mir-135b

Accession

MI0010334

Description

Canis lupus familiaris cfa-mir-135b precursor miRNA

Literature search

8 open access papers mention cfa-mir-135b
(11 sentences)

Sequence

9867 reads, 88.0 reads per million, 76 experiments

gcucugcuguggccUAUGGCUUUUCAUUCCUAUGUGAuugcuguuucuaauucAUGUAGGGCUAAAAGCCAUGGGcuacagugaggggc
((((((((((((((((((((((((...((((((((((..............))))))))))..)))))))))))))))))))..)))))

Structure

     --                   CAU          uugcug 
gcucu  gcuguggccUAUGGCUUUU   UCCUAUGUGA      u
|||||  |||||||||||||||||||   ||||||||||       
cgggg  ugacaucGGGUACCGAAAA   GGGAUGUAcu      u
     ag                   -UC          uaaucu 

Annotation confidence High

Genome context

38: 1923382-1923470 [-]

Mature cfa-miR-135b-5p

• Accession: MIMAT0009839
• Description: Canis lupus familiaris cfa-miR-135b-5p mature miRNA
• Sequence: 15 - UAUGGCUUUUCAUUCCUAUGUGA - 37
• Evidence: not_experimental

Mature cfa-miR-135b-3p

• Accession: MIMAT0051891
• Description: Canis lupus familiaris cfa-miR-135b-3p mature miRNA
• Sequence: 54 - AUGUAGGGCUAAAAGCCAUGGG - 75
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39