Stem-loop cfa-mir-187

Accession

MI0010338

Description

Canis lupus familiaris cfa-mir-187 precursor miRNA

Literature search

6 open access papers mention cfa-mir-187
(7 sentences)

Sequence

15077 reads, 42.0 reads per million, 67 experiments

cuCGGGCUACAACACGGGACCCGGGcgcugcuccgaccccUCGUGUCUUGUGUUGCAGCCGGagggac
(((.((((.((((((((((((.(((((......)).)))...).))))))))))).)))).)))....

Structure

----   G    A           - --C   -  cu 
    cuC GGCU CAACACGGGAC C   GGG cg  g
    ||| |||| ||||||||||| |   ||| ||   
    gaG CCGA GUUGUGUUCUG G   ccc gc  c
cagg   G    C           U CUc   a  cu 

Annotation confidence High

Genome context

7: 54232783-54232850 [+]

Mature cfa-miR-187-5p

• Accession: MIMAT0051895
• Description: Canis lupus familiaris cfa-miR-187-5p mature miRNA
• Sequence: 3 - CGGGCUACAACACGGGACCCGGG - 25
• Evidence: not_experimental

Mature cfa-miR-187-3p

• Accession: MIMAT0009843
• Description: Canis lupus familiaris cfa-miR-187-3p mature miRNA
• Sequence: 41 - UCGUGUCUUGUGUUGCAGCCGG - 62
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39