Stem-loop cfa-mir-202

Accession

MI0010339

Description

Canis lupus familiaris cfa-mir-202 precursor miRNA

Literature search

4 open access papers mention cfa-mir-202
(6 sentences)

Sequence

168730 reads, 2128.0 reads per million, 64 experiments

guuccuuuUUCCUAUGCAUAUACUUCUUUgagggucuggccugaAGAGGUGUAAGGCAUGGGAAAaggggg
..(((((((((((((((.(((((((((((.(((......))))))))))))))..))))))))))))))).

Structure

gu               -A           g   gu 
  uccuuuUUCCUAUGC  UAUACUUCUUU agg  c
  |||||||||||||||  ||||||||||| |||   
  ggggaAAAGGGUACG  AUGUGGAGAag ucc  u
-g               GA           -   gg 

Annotation confidence High

Genome context

28: 41479436-41479506 [-]

Mature cfa-miR-202-5p

• Accession: MIMAT0009844
• Description: Canis lupus familiaris cfa-miR-202-5p mature miRNA
• Sequence: 9 - UUCCUAUGCAUAUACUUCUUU - 29
• Evidence: not_experimental

Mature cfa-miR-202-3p

• Accession: MIMAT0051896
• Description: Canis lupus familiaris cfa-miR-202-3p mature miRNA
• Sequence: 45 - AGAGGUGUAAGGCAUGGGAAA - 65
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39