Stem-loop cfa-mir-205

Accession

MI0010340

Description

Canis lupus familiaris cfa-mir-205 precursor miRNA

Literature search

14 open access papers mention cfa-mir-205
(29 sentences)

Sequence

193054 reads, 825.0 reads per million, 58 experiments

cucuugUCCUUCAUUCCACCGGAGUCUGucucguacccaaccaGAUUUCAGUGGAGUGAAGUUCAggag
((((((..(((((((((((.((((((((.............)))))))).)))))))))))..))))))

Structure

      UC           C        ucucg 
cucuug  CUUCAUUCCAC GGAGUCUG     u
||||||  ||||||||||| ||||||||     a
gaggAC  GAAGUGAGGUG CUUUAGac     c
      UU           A        caacc 

Annotation confidence High

Genome context

7: 7791121-7791189 [+]

Mature cfa-miR-205-5p

• Accession: MIMAT0009845
• Description: Canis lupus familiaris cfa-miR-205-5p mature miRNA
• Sequence: 7 - UCCUUCAUUCCACCGGAGUCUG - 28
• Evidence: not_experimental

Mature cfa-miR-205-3p

• Accession: MIMAT0051897
• Description: Canis lupus familiaris cfa-miR-205-3p mature miRNA
• Sequence: 44 - GAUUUCAGUGGAGUGAAGUUCA - 65
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39