Stem-loop cfa-mir-210

Accession

MI0010341

Description

Canis lupus familiaris cfa-mir-210 precursor miRNA

Literature search

15 open access papers mention cfa-mir-210
(28 sentences)

Sequence

160537 reads, 165.0 reads per million, 82 experiments

ccuccaggcgcagggcAGCCACUGCCCAUCGCACACUGcgcugcuccggacccaCUGUGCGUGUGACAGCGGCUGAucugucccugggcagcgcgacc
..((((((.((((..(((((.((((.((.((((((.((.((((...))).).)).)))))))).).))).)))))..)))).))))))..........

Structure

--------cc      c    gg     A   - C  U      C  c -   c 
          uccagg gcag  cAGCC CUG C CA CGCACA UG g cug  
          |||||| ||||  ||||| ||| | || |||||| || | ||| u
          gggucc uguc  GUCGG GAC G GU GCGUGU ac c ggc  
ccagcgcgac      c    uA     C   A U  -      C  c a   c 

Annotation confidence High

Genome context

18: 26258457-26258554 [-]

Mature cfa-miR-210-5p

• Accession: MIMAT0051898
• Description: Canis lupus familiaris cfa-miR-210-5p mature miRNA
• Sequence: 17 - AGCCACUGCCCAUCGCACACUG - 38
• Evidence: not_experimental

Mature cfa-miR-210-3p

• Accession: MIMAT0009846
• Description: Canis lupus familiaris cfa-miR-210-3p mature miRNA
• Sequence: 55 - CUGUGCGUGUGACAGCGGCUGA - 76
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39