Stem-loop cfa-mir-301a

Accession

MI0010348

Description

Canis lupus familiaris cfa-mir-301a precursor miRNA

Literature search

4 open access papers mention cfa-mir-301a
(16 sentences)

Sequence

112670 reads, 352.0 reads per million, 82 experiments

cugcuaacgaauGCUCUGACUUUAUUGCACUACUguacuuuacagcuagCAGUGCAAUAGUAUUGUCAAAGCaucugaaagcag
(((((..((.(((((.((((.((((((((((.((((........)).)).))))))))))....)))).))))).))..)))))

Structure

     aa  a     C    ---U          A  -  acu 
cugcu  cg auGCU UGAC    UUAUUGCACU CU gu   u
|||||  || ||||| ||||    |||||||||| || ||    
gacga  gu uaCGA ACUG    GAUAACGUGA ga cg   u
     aa  c     A    UUAU          C  u  aca 

Annotation confidence High

Genome context

9: 34529984-34530067 [-]

Mature cfa-miR-301a-5p

• Accession: MIMAT0051905
• Description: Canis lupus familiaris cfa-miR-301a-5p mature miRNA
• Sequence: 13 - GCUCUGACUUUAUUGCACUACU - 34
• Evidence: not_experimental

Mature cfa-miR-301a-3p

• Accession: MIMAT0009853
• Description: Canis lupus familiaris cfa-miR-301a-3p mature miRNA
• Sequence: 50 - CAGUGCAAUAGUAUUGUCAAAGC - 72
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39