Stem-loop cfa-mir-302a

Accession

MI0010350

Description

Canis lupus familiaris cfa-mir-302a precursor miRNA

Literature search

4 open access papers mention cfa-mir-302a
(4 sentences)

Sequence

167 reads, 0.0 reads per million, 25 experiments

ccaccacuUAAACGUGGAUGUACUUGCUUUgaaacucaaaaaGUAAGUGCUUCCAUGUUUUAGUgaugg
(((.((((.(((((((((.(((((((((((.........))))))))))).))))))))).)))).)))

Structure

   c    U         U           gaa 
cca cacu AAACGUGGA GUACUUGCUUU   a
||| |||| ||||||||| |||||||||||   c
ggu gUGA UUUGUACCU CGUGAAUGaaa   u
   a    U         U           aac 

Annotation confidence High

Genome context

32: 32655014-32655082 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cfa-mir-302a

Mature cfa-miR-302a-5p

• Accession: MIMAT0009855
• Description: Canis lupus familiaris cfa-miR-302a-5p mature miRNA
• Sequence: 9 - UAAACGUGGAUGUACUUGCUUU - 30
• Evidence: not_experimental

Mature cfa-miR-302a-3p

• Accession: MIMAT0051907
• Description: Canis lupus familiaris cfa-miR-302a-3p mature miRNA
• Sequence: 43 - GUAAGUGCUUCCAUGUUUUAGU - 64
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39