miRBase entry: cfa-mir-489

Stem-loop cfa-mir-489

Accession

MI0010355

Description

Canis familiaris cfa-mir-489 precursor miRNA

Sequence

guggcagcuugguggccguauguguggcgccauuuacuugaaccuuuaggaGUGACAUCACAUAUACGGCGGCuaaacugcuac
(((((((.(((((.(((((((((((((.(.((((..(((((....))))))))).).))))))))))))).))))).)))))))

Structure

       c     g             c c    ua     a 
guggcag uuggu gccguaugugugg g cauu  cuuga c
||||||| ||||| ||||||||||||| | ||||  |||||  
caucguc aauCG CGGCAUAUACACU C GUGa  ggauu c
       a     G             A A    --     u

Annotation confidence Not enough data

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Genome context

chr14: 18980180-18980263 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-489

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-489

Accession	MIMAT0009860
Description	Canis familiaris cfa-miR-489 mature miRNA
Sequence	52 - GUGACAUCACAUAUACGGCGGC - 73
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39