Stem-loop cfa-mir-33b

Accession

MI0010358

Description

Canis lupus familiaris cfa-mir-33b precursor miRNA

Literature search

2 open access papers mention cfa-mir-33b
(7 sentences)

Sequence

9013 reads, 23.0 reads per million, 75 experiments

gcgggcggccccgcgGUGCAUUGCUGUUGCAUUGCAcgugagugacgcgggugCAGUGCCUCGGCAGUGCAGCCcggagccggccccuggcacc
(((((((((.(((.((((((((((((..(((((((((.((.......)).)))))))))..)))))))))).))))).))).))))...))...

Structure

---  ---    -   c   c  -          UU         g  ag 
   gc   gggc ggc ccg gG UGCAUUGCUG  GCAUUGCAc ug  u
   ||   |||| ||| ||| || ||||||||||  ||||||||| ||  g
   cg   cccg ccg ggc CC ACGUGACGGC  CGUGACgug gc  a
cca  guc    g   a   -  G          UC         g  gc 

Annotation confidence High

Genome context

5: 41791053-41791146 [+]

Mature cfa-miR-33b-5p

• Accession: MIMAT0009862
• Description: Canis lupus familiaris cfa-miR-33b-5p mature miRNA
• Sequence: 16 - GUGCAUUGCUGUUGCAUUGCA - 36
• Evidence: not_experimental

Mature cfa-miR-33b-3p

• Accession: MIMAT0051908
• Description: Canis lupus familiaris cfa-miR-33b-3p mature miRNA
• Sequence: 54 - CAGUGCCUCGGCAGUGCAGCC - 74
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39