miRBase entry: cfa-mir-145

Stem-loop cfa-mir-145

Accession

MI0010359

Description

Canis familiaris cfa-mir-145 precursor miRNA

Sequence

uguccucacgGUCCAGUUUUCCCAGGAAUCCCUuagaugcuaagauggggauuccuggaaauacuguucuugaggucaugguu
((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).))))..))))))).)).....

Structure

-----  u     c  UC    U  C            uagau 
     ug ccuca gG  CAGU UU CCAGGAAUCCCU     g
     || ||||| ||  |||| || ||||||||||||     c
     ac ggagu uc  guca aa gguccuuagggg     u
uuggu  u     -  uu    u  a            uagaa

Annotation confidence Not enough data

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Genome context

chr4: 59533128-59533210 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-145

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-145

Accession	MIMAT0009863
Description	Canis familiaris cfa-miR-145 mature miRNA
Sequence	11 - GUCCAGUUUUCCCAGGAAUCCCU - 33
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39