Stem-loop cfa-mir-203

Accession

MI0010363

Description

Canis lupus familiaris cfa-mir-203 precursor miRNA

Literature search

8 open access papers mention cfa-mir-203
(9 sentences)

Sequence

155143 reads, 996.0 reads per million, 82 experiments

cccggcgcgcuggguccAGUGGUUCUUAACAGUUCAACAguucuguagcgcaaUUGUGAAAUGUUUAGGACCACUAGccccggcgggcccggcg
((.(((.(((((((.(.(((((((((.((((.((((.((((((......).))))))))).)))).))))))))).).))))))).))).))..

Structure

--  c   g       u c         U    G    A     - ug 
  cc ggc cgcuggg c AGUGGUUCU AACA UUCA CAguu c  u
  || ||| ||||||| | ||||||||| |||| |||| ||||| |   
  gg ccg gcggccc G UCACCAGGA UUGU AAGU GUUaa g  a
gc  c   g       c A         U    A    -     c cg 

Annotation confidence High

Genome context

8: 72049450-72049543 [+]

Mature cfa-miR-203-5p

• Accession: MIMAT0051912
• Description: Canis lupus familiaris cfa-miR-203-5p mature miRNA
• Sequence: 18 - AGUGGUUCUUAACAGUUCAACA - 39
• Evidence: not_experimental

Mature cfa-miR-203-3p

• Accession: MIMAT0009866
• Description: Canis lupus familiaris cfa-miR-203-3p mature miRNA
• Sequence: 54 - UUGUGAAAUGUUUAGGACCACUAG - 77
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39