Stem-loop cfa-mir-208b

Accession

MI0010366

Description

Canis lupus familiaris cfa-mir-208b precursor miRNA

Literature search

4 open access papers mention cfa-mir-208b
(24 sentences)

Sequence

55252 reads, 271.0 reads per million, 60 experiments

ccucucagggAAGCUUUUUGCUCGCGUUAUGUUucucauccgaauAUAAGACGAACAAAAGGUUUGUcugaggg
.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).))))))))

Structure

c        g          C   CG        cu 
 cucucagg AAGCUUUUUG UCG  UUAUGUUu  c
 |||||||| |||||||||| |||  ||||||||  a
 gggagucU UUUGGAAAAC AGC  AAUAuaag  u
-        G          A   AG        cc 

Annotation confidence High

Genome context

8: 3772895-3772968 [-]

Mature cfa-miR-208b-5p

• Accession: MIMAT0051913
• Description: Canis lupus familiaris cfa-miR-208b-5p mature miRNA
• Sequence: 11 - AAGCUUUUUGCUCGCGUUAUGUU - 33
• Evidence: not_experimental

Mature cfa-miR-208b-3p

• Accession: MIMAT0009869
• Description: Canis lupus familiaris cfa-miR-208b-3p mature miRNA
• Sequence: 46 - AUAAGACGAACAAAAGGUUUGU - 67
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39