miRBase entry: cfa-mir-190a

Stem-loop cfa-mir-190a


Accession
MI0010369
Description
Canis lupus familiaris cfa-mir-190a precursor miRNA


Sequence

11988 reads, 87.0 reads per million, 77 experiments
ugcaggccucuGUGUGAUAUGUUUGAUAUAUUAGGUuguuauuuaauccaACUAUAUAUCAAACAUAUUCCUacagugucuugcc
.(((((.(.(((((.((((((((((((((((..(((((..........)))))))))))))))))))))..))))).).))))).

Structure
u     c u     -U                UA     uuau 
 gcagg c cuGUG  GAUAUGUUUGAUAUAU  GGUug    u
 ||||| | |||||  ||||||||||||||||  |||||     
 cguuc g gacaU  UUAUACAAACUAUAUA  UCAac    u
c     u u     CC                --     cuaa 


Annotation confidence High
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Genome context
30: 27600354-27600438 [+]

Database links

Mature cfa-miR-190a-5p

Accession MIMAT0009872
Description Canis lupus familiaris cfa-miR-190a-5p mature miRNA
Sequence 12 - GUGUGAUAUGUUUGAUAUAUUAGGU - 36
Evidence not_experimental

Mature cfa-miR-190a-3p

Accession MIMAT0051915
Description Canis lupus familiaris cfa-miR-190a-3p mature miRNA
Sequence 51 - ACUAUAUAUCAAACAUAUUCCU - 72
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39