Stem-loop cfa-mir-147

Accession

MI0010371

Description

Canis lupus familiaris cfa-mir-147 precursor miRNA

Literature search

1 open access papers mention cfa-mir-147
(1 sentences)

Sequence

4118 reads, 29.0 reads per million, 63 experiments

acucuaugaaucuagUGGAAACAUUGCUGCACAAACUAgauuauggauaccaGUGUGCGGAAAUGCUUCUGCUAcauuuuuagggc
.(((((.((((.((((((((.((((.(((((((......(((...))).....))))))).)))).)))))))).)))).))))).

Structure

a     u    c        A    G       AACUAg   a 
 cucua gaau uagUGGAA CAUU CUGCACA      auu  
 ||||| |||| |||||||| |||| |||||||      ||| u
 gggau uuua AUCGUCUU GUAA GGCGUGU      uag  
c     u    c        C    A       -Gacca   g 

Annotation confidence High

Genome context

30: 11937937-11938022 [+]

Mature cfa-miR-147-5p

• Accession: MIMAT0051916
• Description: Canis lupus familiaris cfa-miR-147-5p mature miRNA
• Sequence: 16 - UGGAAACAUUGCUGCACAAACUA - 38
• Evidence: not_experimental

Mature cfa-miR-147-3p

• Accession: MIMAT0009874
• Description: Canis lupus familiaris cfa-miR-147-3p mature miRNA
• Sequence: 53 - GUGUGCGGAAAUGCUUCUGCUA - 74
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39