Stem-loop cfa-mir-514

Accession

MI0010375

Description

Canis lupus familiaris cfa-mir-514 precursor miRNA

Literature search

1 open access papers mention cfa-mir-514
(1 sentences)

Sequence

1749 reads, 28.0 reads per million, 37 experiments

guacccUACUCCAGAGAGUGGCAAUCAUUuguaauuauaugUGAUUGACACCUCUGUGAGUGGAguaaugcaugaca
.(((.(((((((((((.(((.(((((((.(((....))).))))))).)))))))).)))))).)))..........

Structure

---------g   c      -     A   G       U   a 
          uac cUACUC CAGAG GUG CAAUCAU ugu a
          ||| |||||| ||||| ||| ||||||| |||  
          aug GGUGAG GUCUC CAC GUUAGUg aua u
acaguacgua   A      U     -   A       u   u 

Annotation confidence High

Genome context

X: 117742501-117742577 [-]

Mature cfa-miR-514-5p

• Accession: MIMAT0051919
• Description: Canis lupus familiaris cfa-miR-514-5p mature miRNA
• Sequence: 7 - UACUCCAGAGAGUGGCAAUCAUU - 29
• Evidence: not_experimental

Mature cfa-miR-514-3p

• Accession: MIMAT0009877
• Description: Canis lupus familiaris cfa-miR-514-3p mature miRNA
• Sequence: 42 - UGAUUGACACCUCUGUGAGUGGA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39