Stem-loop cfa-mir-299

Accession

MI0010384

Description

Canis lupus familiaris cfa-mir-299 precursor miRNA

Literature search

4 open access papers mention cfa-mir-299
(15 sentences)

Sequence

42096 reads, 122.0 reads per million, 78 experiments

aagaaaUGGUUUACCGUCCCACAUACAUuuugaguaugUAUGUGGGACGGUAAACCGCUUcuu
(((((.((((((((((((((((((((((.......)))))))))))))))))))))).)))))

Structure

     a                      uu 
aagaa UGGUUUACCGUCCCACAUACAU  u
||||| ||||||||||||||||||||||  g
uucUU GCCAAAUGGCAGGGUGUAUgua  a
     C                      ug 

Annotation confidence High

Genome context

8: 69537258-69537320 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from cfa-mir-299

Mature cfa-miR-299-5p

• Accession: MIMAT0009885
• Description: Canis lupus familiaris cfa-miR-299-5p mature miRNA
• Sequence: 7 - UGGUUUACCGUCCCACAUACAU - 28
• Evidence: not_experimental

Mature cfa-miR-299-3p

• Accession: MIMAT0051925
• Description: Canis lupus familiaris cfa-miR-299-3p mature miRNA
• Sequence: 39 - UAUGUGGGACGGUAAACCGCUU - 60
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39