Stem-loop cfa-mir-362

Accession

MI0010385

Description

Canis lupus familiaris cfa-mir-362 precursor miRNA

Literature search

3 open access papers mention cfa-mir-362
(4 sentences)

Sequence

64080 reads, 137.0 reads per million, 81 experiments

gAAUCCUUGGAACCUAGGUGUGAGUgcuauuucggUGCAACACACCUAUUCAAGGAUUCAaagaggcu
(((((((((((...((((((((.(((((.....)))))..))))))))))))))))))).........

Structure

---------           ACC        -A     a 
         gAAUCCUUGGA   UAGGUGUG  GUgcu u
         |||||||||||   ||||||||  ||||| u
         CUUAGGAACUU   AUCCACAC  CGUgg u
ucggagaaA           ---        AA     c 

Annotation confidence High

Genome context

X: 42921213-42921280 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from cfa-mir-362

Mature cfa-miR-362-5p

• Accession: MIMAT0009886
• Description: Canis lupus familiaris cfa-miR-362-5p mature miRNA
• Sequence: 2 - AAUCCUUGGAACCUAGGUGUGAGU - 25
• Evidence: not_experimental

Mature cfa-miR-362-3p

• Accession: MIMAT0051926
• Description: Canis lupus familiaris cfa-miR-362-3p mature miRNA
• Sequence: 36 - UGCAACACACCUAUUCAAGGAUUCA - 60
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39