miRBase entry: cfa-mir-376b

Stem-loop cfa-mir-376b

Accession

MI0010386

Description

Canis familiaris cfa-mir-376b precursor miRNA

Sequence

agucuuucuuugguauuuaaaagguggauauuccuucuauguuuacgugauucauagauaAUCAUAGAGGAAAAUCCAUGUUuucaguaucaaaugcug
........(((((((((.((((.((((((.(((((.(((((.(((.(((...)))...))).)))))))))).)))))).)))).))))))))).....

Structure

agucuuuc         u    g      a     u     u   --c   a 
        uuugguauu aaaa guggau uuccu cuaug uua   gug  
        ||||||||| |||| |||||| ||||| ||||| |||   ||| u
        aaacuauga uuUU UACCUA AAGGA GAUAC Aau   uac  
---gucgu         c    G      A     -     U   aga   u

Annotation confidence Not enough data

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Genome context

chr8: 69270858-69270956 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cfa-mir-376b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-376b

Accession	MIMAT0009887
Description	Canis familiaris cfa-miR-376b mature miRNA
Sequence	61 - AUCAUAGAGGAAAAUCCAUGUU - 82
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39