Stem-loop cfa-mir-376b

Accession

MI0010386

Description

Canis lupus familiaris cfa-mir-376b precursor miRNA

Literature search

1 open access papers mention cfa-mir-376b
(1 sentences)

Sequence

2095 reads, 9.0 reads per million, 64 experiments

agucuuucuuugguauuuaaaAGGUGGAUAUUCCUUCUAUGUUUAcgugauucauagauaAUCAUAGAGGAAAAUCCAUGUUUucaguaucaaaugcug
........(((((((((.((((.((((((.(((((.(((((.(((.(((...)))...))).)))))))))).)))))).)))).))))))))).....

Structure

agucuuuc         u    G      A     U     U   --c   a 
        uuugguauu aaaA GUGGAU UUCCU CUAUG UUA   gug  
        ||||||||| |||| |||||| ||||| ||||| |||   ||| u
        aaacuauga uUUU UACCUA AAGGA GAUAC Aau   uac  
---gucgu         c    G      A     -     U   aga   u 

Annotation confidence High

Genome context

8: 69552568-69552666 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cfa-mir-376b

Mature cfa-miR-376b-5p

• Accession: MIMAT0051927
• Description: Canis lupus familiaris cfa-miR-376b-5p mature miRNA
• Sequence: 22 - AGGUGGAUAUUCCUUCUAUGUUUA - 45
• Evidence: not_experimental

Mature cfa-miR-376b-3p

• Accession: MIMAT0009887
• Description: Canis lupus familiaris cfa-miR-376b-3p mature miRNA
• Sequence: 61 - AUCAUAGAGGAAAAUCCAUGUUU - 83
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39