miRBase entry: cfa-mir-376c

Stem-loop cfa-mir-376c

Accession

MI0010387

Description

Canis familiaris cfa-mir-376c precursor miRNA

Sequence

uuugguauuuaaaagGUGGAUAUUCCUUCUAUGUUUAuguuauuuaugguuaaacauagaggaaauuccacguuuucaguaucaaa
.((((((((.((((.(((((..(((((.(((((((((.............))))))))))))))..))))).)))).)))))))).

Structure

u        u    g     UA     U         uguua 
 uugguauu aaaa GUGGA  UUCCU CUAUGUUUA     u
 |||||||| |||| |||||  ||||| |||||||||     u
 aacuauga uuuu caccu  aagga gauacaaau     u
a        c    g     ua     -         uggua

Annotation confidence Not enough data

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Genome context

chr8: 69270100-69270185 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cfa-mir-376c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-376c

Accession	MIMAT0009888
Description	Canis familiaris cfa-miR-376c mature miRNA
Sequence	16 - GUGGAUAUUCCUUCUAUGUUUA - 37
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39