Stem-loop cfa-mir-376c

Accession

MI0010387

Description

Canis lupus familiaris cfa-mir-376c precursor miRNA

Literature search

2 open access papers mention cfa-mir-376c
(3 sentences)

Sequence

6469 reads, 23.0 reads per million, 71 experiments

uuugguauuuaaaagGUGGAUAUUCCUUCUAUGUUUAuguuauuuaugguuaAACAUAGAGGAAAUUCCACGUuuucaguaucaaa
.((((((((.((((.(((((..(((((.(((((((((.............))))))))))))))..))))).)))).)))))))).

Structure

u        u    g     UA     U         uguua 
 uugguauu aaaa GUGGA  UUCCU CUAUGUUUA     u
 |||||||| |||| |||||  ||||| |||||||||     u
 aacuauga uuuU CACCU  AAGGA GAUACAAau     u
a        c    G     UA     -         uggua 

Annotation confidence High

Genome context

8: 69551810-69551895 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cfa-mir-376c

Mature cfa-miR-376c-5p

• Accession: MIMAT0009888
• Description: Canis lupus familiaris cfa-miR-376c-5p mature miRNA
• Sequence: 16 - GUGGAUAUUCCUUCUAUGUUUA - 37
• Evidence: not_experimental

Mature cfa-miR-376c-3p

• Accession: MIMAT0051928
• Description: Canis lupus familiaris cfa-miR-376c-3p mature miRNA
• Sequence: 53 - AACAUAGAGGAAAUUCCACGU - 73
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39